rodenacker digital image analysis & metrology

Features

Extinction image parameter:

	Whole object [a, m1, m2, m3, min, max, min7, max7, med, md, ent]
	Inside border of object [bia, bim1, bim2, bim3, bimin, bimax, bimin7, bimax7, bimed, bimd, bient] Outside border of object [boa, bom1, bom2, bom3, bomin, bomax, bomin7, bomax7, bomed, bomd, boent]
	Dark particles from flat texture [da, dm1, dm2, dm3, dmin, dmax, dmin7, dmax7, dmed, dmd, dent] Bright particles from flat texture [ha, hm1, hm2, hm3, hmin, hmax, hmin7, hmax7, hmed, hmd, hent]
	Dark regions from rice field [hla, hlm1, hlm2, hlm3, hlmin, hlmax, hlmin7, hlmax7, hlmed, hlmd, hlent]
	Bright regions from rice field [hua, hum1, hum2, hum3, humin, humax, humin7, humax7, humed, humd, huent]
	Background [bga, bgm1, bgm2, bgm3, bgmin, bgmax, bgmin7, bgmax7, bgmed, bgmd, bgent]
	Total image [toa, tom1, tom2, tom3, tomin, tomax, tomin7, tomax7, tomed, tomd, toent]

Transformed image:

	Gradient whole object [ga, gm1, gm2, gm3, gmin, gmax, gmin7, gmax7, gmed, gmd, gent]
	Laplace whole object [la, lm1, lm2, lm3, lmin, lmax, lmin7, lmax7, lmed, lmd, lent]
	Flat texture whole object [fa, fm1, fm2, fm3, fmin, fmax, fmin7, fmax7, fmed, fmd, fent]
	Topological gradient from rice field [rga, rgm1, rgm2, rgm3, rgmin, rgmax, rgmin7, rgmax7, rgmed, rgmd, rgent]
	Local fractal dimension [fra, frm1, frm2, frm3, frmin, frmax, frmin7, frmax7, frmed, frmd, frent]
	Local multi fractal dimension [mfa, mfm1, mfm2, mfm3, mfmin, mfmax, mfmin7, mfmax7, mfmed, mfmd, mfent]

Morphological parameters:

Roundness, centroid coordinates, Box coordinates, 1. - 7. invariant moment, angle of principal axis, maximum extension (, max. inscribable circle) [p2a, kx, ky, lox, loy, rux, ruy, mm1, mm2, mm3, mm4, mm5, mm6, mm7, thetm, ext_max, (rad)]

Morphological two and half dimensional parameters:

	Invariant moments from extinction [im1, im2, im3, im4, im5, im6, im7, itheta]
	Invariant moments from flat texture [nm1, nm2, nm3, nm4, nm5, nm6, nm7, ntheta]

Mayall/Young chromatin parameters

Intermediate parameters [nb, ng, nw, sumd, rm0, rm1, rm2] heterogeneity, clumpiness, margination, radius [hetero, clump, marg, rad]

Co-occurrence texture parameters:

1. Angular 2nd moment
2. contrast
3. correlation
4. variance
5. inverse 2nd diff. moment
6. sum average
7. sum variance
8. sum entropy
9. entropy
10. difference variance
11. difference entropy
12. measure of correlation 1
13. measure of correlation 2
14. local mean

	Extinction [co1, co2, co3, co4, co5, co6, co7, co8, co9, co10, co11, co12, co13, co14]
	Flat texture [nc1, nc2, nc3, nc4, nc5, nc6, nc7, nc8, nc9, nc10, nc11, nc12, nc13, nc14]

Run-length texture parameters:

1. short runs emphasis
2. long runs emphasis
3. grey level non-uniformity
4. run length non-uniformity
5. run length percentage

	Extinction [rl1, rl2, rl3, rl4, rl5]
	Flat texture [nr1, nr2, nr3, nr4, nr5]

Graph parameters

Centers from bright regions from rice field #nodes, total length MST, total length NNG, #triangles Delaunay, #edges Delaunay [eun, eumstl, eunenl, eudtn, eudtk] #nodes with x edges in MST [eumsx (x=0, ..., 6)] #nodes with x edges in Delaunay [eudx (x=0, ..., 9)]

Centers from dark regions from rice field #nodes, total length MST, total length NNG, #triangles Delaunay, #edges Delaunay [eln, elmstl, elnenl, eldtn, eldtk] #nodes with x edges in MST [elmsx (x=0, ..., 6)] #nodes with x edges in Delaunay [eldx (x=0, ..., 9)]